SNP Detail For rs1889321
1.Mapping Information
Human SNP ID rs1889321
Human chromosome chr9
Human SNP position 110538555
Pig chromosome chr1
Pig SNP position 282266981
2.Annotation Information
PubMed ID22424883
JournalJ Allergy Clin Immunol
Linkwww.ncbi.nlm.nih.gov/pubmed/22424883
StudyGenome-wide association study of lung function decline in adults with and without asthma.
Disease/TraitPulmonary function decline
Initial sample1,441 European ancestry asthma cases, 2,677 European ancestry controls
Replication sample1,160 European ancestry asthma cases, 10,858 European ancestry controls
Region9q31.3
Chromosome idchr9
Chromosome position110538555
Reported geneMUSK
Mapped geneSVEP1
Upstream gene id
Downstream gene id
SNP gene ids79987
Upstream gene distance
Downstream gene distance
SNP risk allelers1889321
SNPsrs1889321
Merged0
SNP id current1889321
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000007
Pvalue mlog6.15490195998574
P value text(FEV1 decline in non-asthmatics)
Or beta0.1501
%95 Ci[0.091-0.209] unit decrease
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitforced expiratory volume
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314
Study accessionGCST001444