SNP Detail For rs188867939
1.Mapping Information
Human SNP ID rs188867939
Human chromosome chr11
Human SNP position 22482668
Pig chromosome chr2
Pig SNP position 40216531
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region11p14.3
Chromosome idchr11
Chromosome position22482668
Reported geneIntergenic
Mapped geneLINC01495
Upstream gene id
Downstream gene id
SNP gene ids102723378
Upstream gene distance
Downstream gene distance
SNP risk allelers188867939-G
SNPsrs188867939
Merged0
SNP id current188867939
Contextintron_variant
Intergenic0
Allele frequency0.995
P value0.000003
Pvalue mlog5.52287874528033
P value text(AA)
Or beta0.159
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264