SNP Detail For rs188840013
1.Mapping Information
Human SNP ID rs188840013
Human chromosome chr17
Human SNP position 53914642
Pig chromosome chr12
Pig SNP position 30770727
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region17q22
Chromosome idchr17
Chromosome position53914642
Reported geneIntergenic
Mapped geneKIF2B - LOC100128713
Upstream gene id84643
Downstream gene id100128713
SNP gene ids
Upstream gene distance89430
Downstream gene distance38080
SNP risk allelers188840013-C
SNPsrs188840013
Merged0
SNP id current188840013
Contextintergenic_variant
Intergenic1
Allele frequency0.998
P value0.000003
Pvalue mlog5.52287874528033
P value text(AA)
Or beta1.385
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262