SNP Detail For rs188838161
1.Mapping Information
Human SNP ID rs188838161
Human chromosome chr14
Human SNP position 51821390
Pig chromosome chr1
Pig SNP position 201761205
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region14q22.1
Chromosome idchr14
Chromosome position51821390
Reported geneIntergenic
Mapped geneLOC101927598
Upstream gene id
Downstream gene id
SNP gene ids101927598
Upstream gene distance
Downstream gene distance
SNP risk allelers188838161-T
SNPsrs188838161
Merged0
SNP id current188838161
Contextintron_variant
Intergenic0
Allele frequency0.999
P value0.000002
Pvalue mlog5.69897000433601
P value text(AA)
Or beta0.527
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264