SNP Detail For rs188809019
1.Mapping Information
Human SNP ID rs188809019
Human chromosome chr8
Human SNP position 128273989
Pig chromosome chr4
Pig SNP position 12297833
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region8q24.21
Chromosome idchr8
Chromosome position128273989
Reported geneIntergenic
Mapped geneRN7SKP226 - LINC00824
Upstream gene id106480903
Downstream gene id101927774
SNP gene ids
Upstream gene distance53237
Downstream gene distance131280
SNP risk allelers188809019-T
SNPsrs188809019
Merged0
SNP id current188809019
Contextintergenic_variant
Intergenic1
Allele frequency0.997
P value0.000004
Pvalue mlog5.39794000867203
P value text(AA)
Or beta0.827
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262