SNP Detail For rs188695430
1.Mapping Information
Human SNP ID rs188695430
Human chromosome chr20
Human SNP position 54169727
Pig chromosome chr17
Pig SNP position 61907881
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region20q13.2
Chromosome idchr20
Chromosome position54169727
Reported geneCYP24A1
Mapped geneCYP24A1
Upstream gene id
Downstream gene id
SNP gene ids1591
Upstream gene distance
Downstream gene distance
SNP risk allelers188695430-T
SNPsrs188695430
Merged0
SNP id current188695430
Contextintron_variant
Intergenic0
Allele frequency0.999
P value0.000003
Pvalue mlog5.52287874528033
P value text(AA)
Or beta1.705
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262