SNP Detail For rs188403275
1.Mapping Information
Human SNP ID rs188403275
Human chromosome chr18
Human SNP position 37435185
Pig chromosome chr6
Pig SNP position 114063041
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region18q12.2
Chromosome idchr18
Chromosome position37435185
Reported geneCELF4
Mapped geneCELF4
Upstream gene id
Downstream gene id
SNP gene ids56853
Upstream gene distance
Downstream gene distance
SNP risk allelers188403275-A
SNPsrs188403275
Merged0
SNP id current188403275
Contextintron_variant
Intergenic0
Allele frequency0.006
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta0.407
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region18q12.2
Chromosome idchr18
Chromosome position37435185
Reported geneCELF4
Mapped geneCELF4
Upstream gene id
Downstream gene id
SNP gene ids56853
Upstream gene distance
Downstream gene distance
SNP risk allelers188403275-A
SNPsrs188403275
Merged0
SNP id current188403275
Contextintron_variant
Intergenic0
Allele frequency0.006
P value0.00000004
Pvalue mlog7.39794000867203
P value text
Or beta0.091
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264