SNP Detail For rs1883832
1.Mapping Information
Human SNP ID rs1883832
Human chromosome chr20
Human SNP position 46118343
Pig chromosome chr17
Pig SNP position 53932000
2.Annotation Information
PubMed ID25802187
JournalHepatology
Linkwww.ncbi.nlm.nih.gov/pubmed/25802187
StudyGenetic variants in five novel loci including CFB and CD40 predispose to chronic hepatitis B.
Disease/TraitChronic hepatitis B infection
Initial sample2,514 Chinese ancestry cases, 1,130 Chinese ancestry controls
Replication sample6,600 Chinese ancestry cases, 8,127 Chinese ancestry controls
Region20q13.12
Chromosome idchr20
Chromosome position46118343
Reported geneCD40
Mapped geneCD40
Upstream gene id
Downstream gene id
SNP gene ids958
Upstream gene distance
Downstream gene distance
SNP risk allelers1883832-T
SNPsrs1883832
Merged0
SNP id current1883832
Context5_prime_UTR_variant
Intergenic0
Allele frequency0.37
P value0.000000000000003
Pvalue mlog14.5228787452803
P value text
Or beta1.19
%95 Ci[1.14-1.25]
PlatformIllumina [3680900] (imputed)
CNVN
Mapped traitchronic hepatitis B infection
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004239
Study accessionGCST002879