SNP Detail For rs1883460
1.Mapping Information
Human SNP ID rs1883460
Human chromosome chr1
Human SNP position 70993175
Pig chromosome chr6
Pig SNP position 131633911
2.Annotation Information
PubMed ID25648963
JournalBiol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/25648963
StudyGenome-wide Studies of Verbal Declarative Memory in Nondemented Older People: The Cohorts for Heart and Aging Research in Genomic Epidemiology Consortium.
Disease/TraitVerbal declarative memory
Initial sampleUp to 27,337 European ancestry individuals, up to 472 Korkulan individuals, up to 1,267 Erasmus Rucphen Family individuals
Replication sampleUp to 10,617 European ancestry individuals, up to 3,811 African American individuals
Region1p31.1
Chromosome idchr1
Chromosome position70993175
Reported genePTGER3, ZRANB2
Mapped genePTGER3
Upstream gene id
Downstream gene id
SNP gene ids5733
Upstream gene distance
Downstream gene distance
SNP risk allelers1883460-T
SNPsrs1883460
Merged0
SNP id current1883460
Contextintron_variant
Intergenic0
Allele frequency0.39
P value0.000002
Pvalue mlog5.69897000433601
P value text(ALL-dr, EA)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traitword list delayed recall measurement, memory performance, paragraph delayed recall measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006805, http://www.ebi.ac.uk/efo/EFO_0004874, http://www.ebi.ac.uk/efo/EFO_0006806
Study accessionGCST002701