SNP Detail For rs1876040
1.Mapping Information
Human SNP ID rs1876040
Human chromosome chr2
Human SNP position 18953470
Pig chromosome chr3
Pig SNP position 127183788
2.Annotation Information
PubMed ID20125193
JournalEur J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20125193
StudyCommon genetic variation and performance on standardized cognitive tests.
Disease/TraitCognitive performance
Initial sampleUp to 813 European ancestry individuals, up to 167 East Asian ancestry individuals, up to 7 Hispanic/Latin American individuals, up to 74 South Asian ancestry individuals
Replication sampleNA
Region2p24.2
Chromosome idchr2
Chromosome position18953470
Reported geneAC092594.1
Mapped geneLOC105373456
Upstream gene id
Downstream gene id
SNP gene ids105373456
Upstream gene distance
Downstream gene distance
SNP risk allelers1876040-?
SNPsrs1876040
Merged0
SNP id current1876040
Contextintergenic_variant
Intergenic0
Allele frequencyNR
P value0.00000006
Pvalue mlog7.22184874961635
P value text(Digit Span Backward)
Or beta
%95 Ci
PlatformIllumina [up to 563855]
CNVN
Mapped traitneuropsychological test
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003926
Study accessionGCST000579