Human SNP ID | rs1871859 |
---|---|
Human chromosome | chr6 |
Human SNP position | 151577371 |
Pig chromosome | chr1 |
Pig SNP position | 17101822 |
PubMed ID | 24249740 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24249740 |
Study | Multistage genome-wide association meta-analyses identified two new loci for bone mineral density. |
Disease/Trait | Bone mineral density |
Initial sample | 5,833 European ancestry females, 2,639 European ancestry males, 784 Han Chinese ancestry females, 763 Han Chinese ancestry males, 712 African American females, 409 Hispanic females |
Replication sample | 7,010 European ancestry females, 3,772 European ancestry males, 2,980 East Asian ancestry females, 2,159 East Asian ancestry males |
Region | 6q25.1 |
Chromosome id | chr6 |
Chromosome position | 151577371 |
Reported gene | C6orf97 |
Mapped gene | CCDC170 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 80129 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1871859-? |
SNPs | rs1871859 |
Merged | 0 |
SNP id current | 1871859 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000000000009 |
Pvalue mlog | 12.0457574905606 |
P value text | (spine) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [5842825] (imputed) |
CNV | N |
Mapped trait | bone density |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003923 |
Study accession | GCST002276 |