SNP Detail For rs1870805
1.Mapping Information
Human SNP ID rs1870805
Human chromosome chr8
Human SNP position 139985033
Pig chromosome chr4
Pig SNP position 2860922
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region8q24.3
Chromosome idchr8
Chromosome position139985033
Reported geneTRAPPC9
Mapped geneTRAPPC9
Upstream gene id
Downstream gene id
SNP gene ids83696
Upstream gene distance
Downstream gene distance
SNP risk allelers1870805-A
SNPsrs1870805
Merged0
SNP id current1870805
Contextintron_variant
Intergenic0
Allele frequency0.275
P value0.000003
Pvalue mlog5.52287874528033
P value text(Urinary nitrogen )
Or beta0.03
%95 Ci[NR] g/d increase
PlatformIllumina [899892]
CNVN
Mapped traiturinary nitrogen measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005190
Study accessionGCST001762