SNP Detail For rs1870653
1.Mapping Information
Human SNP ID rs1870653
Human chromosome chr4
Human SNP position 114477044
Pig chromosome chr8
Pig SNP position 116373382
2.Annotation Information
PubMed ID26242244
JournalSci Rep
Linkwww.ncbi.nlm.nih.gov/pubmed/26242244
StudyAssociation of chromosome 5q21.3 polymorphisms with the exploratory eye movement dysfunction in schizophrenia.
Disease/TraitExploratory eye movement dysfunction in schizophrenia (number of eye fixations)
Initial sample128 Han Chinese ancestry cases
Replication sampleNA
Region4q26
Chromosome idchr4
Chromosome position114477044
Reported geneNR
Mapped geneLOC105377379
Upstream gene id
Downstream gene id
SNP gene ids105377379
Upstream gene distance
Downstream gene distance
SNP risk allelers1870653-?
SNPsrs1870653
Merged
SNP id current1870653
Contextintergenic_variant
Intergenic0
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta12.67
%95 Ci[7.34-18] unit decrease
PlatformIllumina [498648]
CNVN
Mapped traitexploratory eye movement measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007700
Study accessionGCST003068