Human SNP ID | rs1870323 |
---|---|
Human chromosome | chr11 |
Human SNP position | 86477110 |
Pig chromosome | chr9 |
Pig SNP position | 22626009 |
PubMed ID | 24025145 |
---|---|
Journal | Breast Cancer Res |
Link | www.ncbi.nlm.nih.gov/pubmed/24025145 |
Study | A genome-wide association study of chemotherapy-induced alopecia in breast cancer patients. |
Disease/Trait | Adverse response to chemotherapy in breast cancer (alopecia) (anti-microtubule) |
Initial sample | 119 Japanese ancestry cases, 105 Japanese ancestry controls |
Replication sample | NA |
Region | 11q14.2 |
Chromosome id | chr11 |
Chromosome position | 86477110 |
Reported gene | ME3 |
Mapped gene | ME3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 10873 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1870323-T |
SNPs | rs1870323 |
Merged | 0 |
SNP id current | 1870323 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.64 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (Allelic) |
Or beta | 2.92 |
%95 Ci | [1.87-4.57] |
Platform | Illumina [555600] |
CNV | N |
Mapped trait | chemotherapy-induced alopecia, response to antimicrotubule agent |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005400, http://www.ebi.ac.uk/efo/EFO_0005260 |
Study accession | GCST002177 |