SNP Detail For rs1865075
1.Mapping Information
Human SNP ID rs1865075
Human chromosome chr19
Human SNP position 22372052
Pig chromosome chr8
Pig SNP position 111219904
2.Annotation Information
PubMed ID23259602
JournalBMC Oral Health
Linkwww.ncbi.nlm.nih.gov/pubmed/23259602
StudyGenome-wide association scan of dental caries in the permanent dentition.
Disease/TraitDental caries
Initial sample1,483 European ancestry comparatively younger individuals, 5,960 European ancestry comparatively older individuals
Replication sampleNA
Region19p12
Chromosome idchr19
Chromosome position22372052
Reported geneLOC342994
Mapped geneLOC105372329 - ZNF98
Upstream gene id105372329
Downstream gene id148198
SNP gene ids
Upstream gene distance19590
Downstream gene distance18959
SNP risk allelers1865075-?
SNPsrs1865075
Merged0
SNP id current1865075
Contextupstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text(Comparatively Younger)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [~ 1400000] (imputed)
CNVN
Mapped traitdental caries
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003819
Study accessionGCST001786