Human SNP ID | rs1865075 |
---|---|
Human chromosome | chr19 |
Human SNP position | 22372052 |
Pig chromosome | chr8 |
Pig SNP position | 111219904 |
PubMed ID | 23259602 |
---|---|
Journal | BMC Oral Health |
Link | www.ncbi.nlm.nih.gov/pubmed/23259602 |
Study | Genome-wide association scan of dental caries in the permanent dentition. |
Disease/Trait | Dental caries |
Initial sample | 1,483 European ancestry comparatively younger individuals, 5,960 European ancestry comparatively older individuals |
Replication sample | NA |
Region | 19p12 |
Chromosome id | chr19 |
Chromosome position | 22372052 |
Reported gene | LOC342994 |
Mapped gene | LOC105372329 - ZNF98 |
Upstream gene id | 105372329 |
Downstream gene id | 148198 |
SNP gene ids | |
Upstream gene distance | 19590 |
Downstream gene distance | 18959 |
SNP risk allele | rs1865075-? |
SNPs | rs1865075 |
Merged | 0 |
SNP id current | 1865075 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (Comparatively Younger) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 1400000] (imputed) |
CNV | N |
Mapped trait | dental caries |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003819 |
Study accession | GCST001786 |