Human SNP ID | rs186248261 |
---|---|
Human chromosome | chr3 |
Human SNP position | 134335855 |
Pig chromosome | chr13 |
Pig SNP position | 83003983 |
PubMed ID | 25839716 |
---|---|
Journal | Environ Res |
Link | www.ncbi.nlm.nih.gov/pubmed/25839716 |
Study | Genome-wide association study of plasma levels of polychlorinated biphenyls disclose an association with the CYP2B6 gene in a population-based sample. |
Disease/Trait | Polychlorinated biphenyl levels |
Initial sample | 922 European ancestry individuals |
Replication sample | NA |
Region | 3q22.2 |
Chromosome id | chr3 |
Chromosome position | 134335855 |
Reported gene | NR |
Mapped gene | LOC105374118 - RPL39P5 |
Upstream gene id | 105374118 |
Downstream gene id | 553117 |
SNP gene ids | |
Upstream gene distance | 8556 |
Downstream gene distance | 15884 |
SNP risk allele | rs186248261-? |
SNPs | rs186248261 |
Merged | 0 |
SNP id current | 186248261 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | (PCB206) |
Or beta | 1.26 |
%95 Ci | [0.75-1.77] unit decrease |
Platform | Illumina [8736858] (imputed) |
CNV | N |
Mapped trait | polychlorinated biphenyls measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007042 |
Study accession | GCST002839 |