SNP Detail For rs1861960
1.Mapping Information
Human SNP ID rs1861960
Human chromosome chr7
Human SNP position 155492440
Pig chromosome chr18
Pig SNP position 2966480
2.Annotation Information
PubMed ID23793025
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23793025
StudyGenome-wide meta-analysis identifies new susceptibility loci for migraine.
Disease/TraitMigraine
Initial sample23,285 European ancestry cases, 95,425 European ancestry controls
Replication sampleNA
Region7q36.3
Chromosome idchr7
Chromosome position155492440
Reported geneintergenic
Mapped geneEN2 - CNPY1
Upstream gene id2020
Downstream gene id285888
SNP gene ids
Upstream gene distance27609
Downstream gene distance8818
SNP risk allelers1861960-T
SNPsrs1861960
Merged0
SNP id current1861960
Contextintron_variant
Intergenic1
Allele frequency0.2
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta1.07
%95 Ci[1.04-1.10]
PlatformAffymetrix, Illumina [~ 2300000] (imputed)
CNVN
Mapped traitmigraine disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003821
Study accessionGCST002081