SNP Detail For rs1840440
1.Mapping Information
Human SNP ID rs1840440
Human chromosome chr18
Human SNP position 25677222
Pig chromosome chr6
Pig SNP position 103379705
2.Annotation Information
PubMed ID19851299
JournalObesity (Silver Spring)
Linkwww.ncbi.nlm.nih.gov/pubmed/19851299
StudyLinkage and genome-wide association analysis of obesity-related phenotypes: association of weight with the MGAT1 gene.
Disease/TraitWeight
Initial sampleUp to 3,925 European individuals
Replication sampleNA
Region18q11.2
Chromosome idchr18
Chromosome position25677222
Reported geneNR
Mapped geneZNF521 - LOC105372033
Upstream gene id25925
Downstream gene id105372033
SNP gene ids
Upstream gene distance324972
Downstream gene distance280762
SNP risk allelers1840440-G
SNPsrs1840440
Merged0
SNP id current1840440
Contextintergenic_variant
Intergenic1
Allele frequency0.61
P value0.0000003
Pvalue mlog6.52287874528033
P value text(females)
Or beta2.16
%95 Ci[NR] kg increase
PlatformIllumina [318237]
CNVN
Mapped traitbody weight
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004338
Study accessionGCST000511