SNP Detail For rs183699028
1.Mapping Information
Human SNP ID rs183699028
Human chromosome chr2
Human SNP position 14017130
Pig chromosome chr3
Pig SNP position 131621619
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region2p24.3
Chromosome idchr2
Chromosome position14017130
Reported geneIntergenic
Mapped geneLOC107985854 - LINC00276
Upstream gene id107985854
Downstream gene id100499171
SNP gene ids
Upstream gene distance107429
Downstream gene distance211744
SNP risk allelers183699028-A
SNPsrs183699028
Merged0
SNP id current183699028
Contextintron_variant
Intergenic1
Allele frequency0.989
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.303
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262