Human SNP ID | rs1835740 |
---|---|
Human chromosome | chr8 |
Human SNP position | 97154685 |
Pig chromosome | chr4 |
Pig SNP position | 42473826 |
PubMed ID | 20802479 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20802479 |
Study | Genome-wide association study of migraine implicates a common susceptibility variant on 8q22.1. |
Disease/Trait | Migraine |
Initial sample | 2,731 European ancestry cases, 10,747 European ancestry controls |
Replication sample | 3,202 European ancestry cases, 40,062 European ancestry controls |
Region | 8q22.1 |
Chromosome id | chr8 |
Chromosome position | 97154685 |
Reported gene | MTDH, PGCP |
Mapped gene | LOC101927066, LOC105375655 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 101927066, 105375655 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1835740-A |
SNPs | rs1835740 |
Merged | 0 |
SNP id current | 1835740 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.21 |
P value | 0.00000000002 |
Pvalue mlog | 10.698970004336 |
P value text | |
Or beta | 1.18 |
%95 Ci | [1.13-1.24] |
Platform | Illumina [429912] |
CNV | N |
Mapped trait | migraine disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003821 |
Study accession | GCST000782 |