Human SNP ID | rs1834481 |
---|---|
Human chromosome | chr11 |
Human SNP position | 112153104 |
Pig chromosome | chr9 |
Pig SNP position | 44699814 |
PubMed ID | 20150558 |
---|---|
Journal | Arterioscler Thromb Vasc Biol |
Link | www.ncbi.nlm.nih.gov/pubmed/20150558 |
Study | Genome-wide association study identifies variants at the IL18-BCO2 locus associated with interleukin-18 levels. |
Disease/Trait | Interleukin-18 levels |
Initial sample | 1,523 European ancestry female individuals |
Replication sample | 435 European ancestry female individuals |
Region | 11q23.1 |
Chromosome id | chr11 |
Chromosome position | 112153104 |
Reported gene | BCO2 |
Mapped gene | IL18 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3606 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1834481-G |
SNPs | rs1834481 |
Merged | 0 |
SNP id current | 1834481 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | 0.24 |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [704409] |
CNV | N |
Mapped trait | interleukin 18 measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004581 |
Study accession | GCST000590 |