SNP Detail For rs182751789
1.Mapping Information
Human SNP ID rs182751789
Human chromosome chr2
Human SNP position 55990538
Pig chromosome chr3
Pig SNP position 90057143
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region2p16.1
Chromosome idchr2
Chromosome position55990538
Reported geneBC043355
Mapped geneMIR217HG, LOC105374690
Upstream gene id
Downstream gene id
SNP gene ids104355290, 105374690
Upstream gene distance
Downstream gene distance
SNP risk allelers182751789-C
SNPsrs182751789
Merged0
SNP id current182751789
Contextintron_variant
Intergenic0
Allele frequency0.997
P value0.000004
Pvalue mlog5.39794000867203
P value text(AA)
Or beta0.181
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264