Human SNP ID | rs1825500 |
---|---|
Human chromosome | chr3 |
Human SNP position | 7975268 |
Pig chromosome | chr13 |
Pig SNP position | 71596359 |
PubMed ID | 25811787 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25811787 |
Study | Modulation of Genetic Associations with Serum Urate Levels by Body-Mass-Index in Humans. |
Disease/Trait | Urate levels in lean individuals |
Initial sample | up to 5,529 European ancestry male individuals, up to 9,753 European ancestry female individuals |
Replication sample | NA |
Region | 3p26.1 |
Chromosome id | chr3 |
Chromosome position | 7975268 |
Reported gene | GRM7, LMCD1_AS1 |
Mapped gene | LOC101927394 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 101927394 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1825500-C |
SNPs | rs1825500 |
Merged | 0 |
SNP id current | 1825500 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.81 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 0.08 |
%95 Ci | [0.047-0.113] kg/m2 decrease |
Platform | Affymetrix, Illumina [at least 188473] (imputed) |
CNV | N |
Mapped trait | urate measurement, underweight body mass index status |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004531, http://www.ebi.ac.uk/efo/EFO_0005936 |
Study accession | GCST002830 |
PubMed ID | 25811787 |
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25811787 |
Study | Modulation of Genetic Associations with Serum Urate Levels by Body-Mass-Index in Humans. |
Disease/Trait | Urate levels in lean individuals |
Initial sample | up to 5,529 European ancestry male individuals, up to 9,753 European ancestry female individuals |
Replication sample | NA |
Region | 3p26.1 |
Chromosome id | chr3 |
Chromosome position | 7975268 |
Reported gene | GRM7, LMCD1_AS1 |
Mapped gene | LOC101927394 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 101927394 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1825500-C |
SNPs | rs1825500 |
Merged | 0 |
SNP id current | 1825500 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.81 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (men) |
Or beta | 0.129 |
%95 Ci | [0.074-0.184] kg/m2 decrease |
Platform | Affymetrix, Illumina [at least 188473] (imputed) |
CNV | N |
Mapped trait | urate measurement, underweight body mass index status |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004531, http://www.ebi.ac.uk/efo/EFO_0005936 |
Study accession | GCST002830 |