SNP Detail For rs182429428
1.Mapping Information
Human SNP ID rs182429428
Human chromosome chr20
Human SNP position 11927362
Pig chromosome chr17
Pig SNP position 23463158
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region20p12.2
Chromosome idchr20
Chromosome position11927362
Reported geneIntergenic
Mapped geneBTBD3 - LOC105372531
Upstream gene id22903
Downstream gene id105372531
SNP gene ids
Upstream gene distance767
Downstream gene distance25657
SNP risk allelers182429428-C
SNPsrs182429428
Merged0
SNP id current182429428
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.999
P value0.000003
Pvalue mlog5.52287874528033
P value text(AA)
Or beta2.627
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262