SNP Detail For rs182328274
1.Mapping Information
Human SNP ID rs182328274
Human chromosome chr12
Human SNP position 107274025
Pig chromosome chr5
Pig SNP position 12961927
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region12q23.3
Chromosome idchr12
Chromosome position107274025
Reported geneIntergenic
Mapped geneSETP7 - BTBD11
Upstream gene id100873166
Downstream gene id121551
SNP gene ids
Upstream gene distance2182
Downstream gene distance43143
SNP risk allelers182328274-T
SNPsrs182328274
Merged0
SNP id current182328274
Contextdownstream_gene_variant
Intergenic1
Allele frequency1
P value0.000001
Pvalue mlog6
P value text(AA)
Or beta0.801
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264