SNP Detail For rs1821625
1.Mapping Information
Human SNP ID rs1821625
Human chromosome chr2
Human SNP position 133472646
Pig chromosome chr15
Pig SNP position 21144192
2.Annotation Information
PubMed ID23412934
JournalBrain
Linkwww.ncbi.nlm.nih.gov/pubmed/23412934
StudyA genome-wide association study of brain lesion distribution in multiple sclerosis.
Disease/TraitMultiple sclerosis
Initial sample284 European ancestry individuals
Replication sample
Region2q21.2
Chromosome idchr2
Chromosome position133472646
Reported geneNAP5
Mapped geneNCKAP5
Upstream gene id
Downstream gene id
SNP gene ids344148
Upstream gene distance
Downstream gene distance
SNP risk allelers1821625-?
SNPsrs1821625
Merged0
SNP id current1821625
Contextintron_variant
Intergenic0
Allele frequency
P value0.000007
Pvalue mlog5.15490195998574
P value text(Cluxel size)
Or beta
%95 Ci
PlatformIllumina [208975]
CNVN
Mapped traitmultiple sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003885
Study accessionGCST001860