SNP Detail For rs181840477
1.Mapping Information
Human SNP ID rs181840477
Human chromosome chr3
Human SNP position 152775700
Pig chromosome chr13
Pig SNP position 100980145
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region3q25.2
Chromosome idchr3
Chromosome position152775700
Reported geneIntergenic
Mapped geneLOC102724289 - ATP5LP5
Upstream gene id102724289
Downstream gene id100287091
SNP gene ids
Upstream gene distance93956
Downstream gene distance24734
SNP risk allelers181840477-T
SNPsrs181840477
Merged0
SNP id current181840477
Contextintergenic_variant
Intergenic1
Allele frequency0.999
P value0.00000005
Pvalue mlog7.30102999566398
P value text(AA)
Or beta2.235
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262