Human SNP ID | rs181715218 |
---|---|
Human chromosome | chr10 |
Human SNP position | 79425558 |
Pig chromosome | JH118438-1 |
Pig SNP position | 38430 |
PubMed ID | 24159190 |
---|---|
Journal | Eur Heart J |
Link | www.ncbi.nlm.nih.gov/pubmed/24159190 |
Study | Genome-wide association study on dimethylarginines reveals novel AGXT2 variants associated with heart rate variability but not with overall mortality. |
Disease/Trait | Serum dimethylarginine levels (asymmetric/symetric ratio) |
Initial sample | 5110 European ancestry individuals |
Replication sample | NA |
Region | 10q22.3 |
Chromosome id | chr10 |
Chromosome position | 79425558 |
Reported gene | NR |
Mapped gene | ZCCHC24 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 219654 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs181715218-T |
SNPs | rs181715218 |
Merged | 0 |
SNP id current | 181715218 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.996 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 1.3 |
%95 Ci | [0.76-1.84] unit decrease |
Platform | Affymetrix, Illumina [10085758] (imputed) |
CNV | N |
Mapped trait | serum dimethylarginine measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005418 |
Study accession | GCST002242 |