SNP Detail For rs181563674
1.Mapping Information
Human SNP ID rs181563674
Human chromosome chr11
Human SNP position 77301788
Pig chromosome chr9
Pig SNP position 12972054
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region11q13.5
Chromosome idchr11
Chromosome position77301788
Reported geneIntergenic
Mapped geneGDPD4 - LOC105369446
Upstream gene id220032
Downstream gene id105369446
SNP gene ids
Upstream gene distance89
Downstream gene distance11678
SNP risk allelers181563674-T
SNPsrs181563674
Merged0
SNP id current181563674
Contextupstream_gene_variant
Intergenic1
Allele frequency0.997
P value0.000002
Pvalue mlog5.69897000433601
P value text(AA)
Or beta0.165
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264