SNP Detail For rs181519890
1.Mapping Information
Human SNP ID rs181519890
Human chromosome chr4
Human SNP position 86762562
Pig chromosome chr8
Pig SNP position 141418958
2.Annotation Information
PubMed ID24159190
JournalEur Heart J
Linkwww.ncbi.nlm.nih.gov/pubmed/24159190
StudyGenome-wide association study on dimethylarginines reveals novel AGXT2 variants associated with heart rate variability but not with overall mortality.
Disease/TraitSymmetrical dimethylarginine levels
Initial sample5110 European ancestry individuals
Replication sampleNA
Region4q21.3
Chromosome idchr4
Chromosome position86762562
Reported geneNR
Mapped genePTPN13
Upstream gene id
Downstream gene id
SNP gene ids5783
Upstream gene distance
Downstream gene distance
SNP risk allelers181519890-C
SNPsrs181519890
Merged0
SNP id current181519890
Contextintron_variant
Intergenic0
Allele frequency0.003
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta1.063
%95 Ci[0.60-1.52] unit increase
PlatformAffymetrix, Illumina [10085758] (imputed)
CNVN
Mapped traitserum dimethylarginine measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005418
Study accessionGCST002239