SNP Detail For rs181293434
1.Mapping Information
Human SNP ID rs181293434
Human chromosome chr14
Human SNP position 61551126
Pig chromosome chr1
Pig SNP position 211817952
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region14q23.1
Chromosome idchr14
Chromosome position61551126
Reported geneIntergenic
Mapped genePRKCH - LOC101927780
Upstream gene id5583
Downstream gene id101927780
SNP gene ids
Upstream gene distance146
Downstream gene distance5146
SNP risk allelers181293434-T
SNPsrs181293434
Merged0
SNP id current181293434
Contextintron_variant
Intergenic1
Allele frequency0.999
P value0.000003
Pvalue mlog5.52287874528033
P value text(AA)
Or beta0.282
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264