SNP Detail For rs181166265
1.Mapping Information
Human SNP ID rs181166265
Human chromosome chr8
Human SNP position 80072800
Pig chromosome chr3
Pig SNP position 16190869
2.Annotation Information
PubMed ID23319000
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/23319000
StudyGenome-wide association study of monoamine metabolite levels in human cerebrospinal fluid.
Disease/TraitMetabolite levels (HVA/MHPG ratio)
Initial sampleup to 398 European ancestry individuals
Replication sampleNA
Region8q21.13
Chromosome idchr8
Chromosome position80072800
Reported geneTPD52
Mapped geneTPD52
Upstream gene id
Downstream gene id
SNP gene ids7163
Upstream gene distance
Downstream gene distance
SNP risk allelers181166265-C
SNPsrs181166265
Merged0
SNP id current181166265
Contextintron_variant
Intergenic0
Allele frequency
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta0.2952
%95 Ciunit increase
PlatformIllumina [5767231] (imputed)
CNVN
Mapped traitHVA measurement, MHPG measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005131, http://www.ebi.ac.uk/efo/EFO_0005133
Study accessionGCST001823