SNP Detail For rs1810320
1.Mapping Information
Human SNP ID rs1810320
Human chromosome chr3
Human SNP position 7242282
Pig chromosome chr13
Pig SNP position 70698269
2.Annotation Information
PubMed ID23468962
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23468962
StudyA genome-wide scan for breast cancer risk haplotypes among African American women.
Disease/TraitBreast cancer
Initial sample3,016 African American cases, 2,745 African American controls
Replication sampleNA
Region3p26.1
Chromosome idchr3;3
Chromosome position7220327;7242282
Reported gene
Mapped geneGRM7; GRM7
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers6797852-?; rs1810320-?
SNPsrs6797852; rs1810320
Merged0
SNP id current
Contextintron_variant; intron_variant
Intergenic
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta
%95 Ci
PlatformIllumina [1006480]
CNVN
Mapped traitbreast carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000305
Study accessionGCST001879