Human SNP ID | rs180771047 |
---|---|
Human chromosome | chr2 |
Human SNP position | 226321135 |
Pig chromosome | chr15 |
Pig SNP position | 141440177 |
PubMed ID | 26252872 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/26252872 |
Study | Variations in the FRA10AC1 Fragile Site and 15q21 Are Associated with Cerebrospinal Fluid Aå°¾1-42 Level. |
Disease/Trait | Cerebral amyloid deposition in APOEe4 non-carriers (PET imaging) |
Initial sample | 370 European and other ancestry APOEe4 non-carriers |
Replication sample | NA |
Region | 2q36.3 |
Chromosome id | chr2 |
Chromosome position | 226321135 |
Reported gene | LOC646736, MIR5702 |
Mapped gene | LOC105373913 - LOC105373915 |
Upstream gene id | 105373913 |
Downstream gene id | 105373915 |
SNP gene ids | |
Upstream gene distance | 35263 |
Downstream gene distance | 133647 |
SNP risk allele | rs180771047-G |
SNPs | rs180771047 |
Merged | |
SNP id current | 180771047 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.0027 |
P value | 0.00000006 |
Pvalue mlog | 7.22184874961635 |
P value text | |
Or beta | 0.3689 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [~ 9000000] (imputed) |
CNV | N |
Mapped trait | cerebral amyloid deposition measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007707 |
Study accession | GCST003074 |