SNP Detail For rs1805203
1.Mapping Information
Human SNP ID rs1805203
Human chromosome chr3
Human SNP position 181056092
Pig chromosome chr13
Pig SNP position 128215219
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region3q26.33
Chromosome idchr3
Chromosome position181056092
Reported geneNR
Mapped geneDNAJC19 - SOX2-OT
Upstream gene id131118
Downstream gene id347689
SNP gene ids
Upstream gene distance66318
Downstream gene distance588
SNP risk allelers1805203-G
SNPsrs1805203
Merged
SNP id current1805203
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta1.0869565
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048