SNP Detail For rs1805128
1.Mapping Information
Human SNP ID rs1805128
Human chromosome chr21
Human SNP position 34449382
Pig chromosome chr13
Pig SNP position 207880150
2.Annotation Information
PubMed ID24952745
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24952745
StudyGenetic association study of QT interval highlights role for calcium signaling pathways in myocardial repolarization.
Disease/TraitQT interval
Initial sampleUp to 70,389 European ancestry individuals, up to 672 Orcadian individuals
Replication sampleUp to 33,316 European ancestry individuals
Region21q22.12
Chromosome idchr21
Chromosome position34449382
Reported geneKCNE1
Mapped geneKCNE1
Upstream gene id
Downstream gene id
SNP gene ids3753
Upstream gene distance
Downstream gene distance
SNP risk allelers1805128-T
SNPsrs1805128
Merged0
SNP id current1805128
Contextmissense_variant
Intergenic0
Allele frequency0.01
P value0.000000000000000002
Pvalue mlog17.698970004336
P value text
Or beta7.42
%95 Ci[5.75-9.09] unit increase
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitQT interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004682
Study accessionGCST002500