Human SNP ID | rs180242 |
---|---|
Human chromosome | chr7 |
Human SNP position | 93920284 |
Pig chromosome | chr9 |
Pig SNP position | 80761161 |
PubMed ID | 23583979 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23583979 |
Study | Identification of heart rate-associated loci and their effects on cardiac conduction and rhythm disorders. |
Disease/Trait | Heart rate |
Initial sample | 85,787 European ancestry individuals, 6,568 Indian Asian ancestry indiviudals |
Replication sample | 88,823 European ancestry individuals |
Region | 7q21.3 |
Chromosome id | chr7 |
Chromosome position | 93920284 |
Reported gene | GNG11 |
Mapped gene | LOC105375402 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105375402 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs180242-T |
SNPs | rs180242 |
Merged | 0 |
SNP id current | 180242 |
Context | upstream_gene_variant |
Intergenic | 0 |
Allele frequency | 0.333 |
P value | 0.000000000007 |
Pvalue mlog | 11.1549019599857 |
P value text | |
Or beta | 0.316 |
%95 Ci | [0.21-0.42] unit increase |
Platform | Affymetrix, Illumina [2516789] (imputed) |
CNV | N |
Mapped trait | heart rate |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004326 |
Study accession | GCST001969 |