SNP Detail For rs180242
1.Mapping Information
Human SNP ID rs180242
Human chromosome chr7
Human SNP position 93920284
Pig chromosome chr9
Pig SNP position 80761161
2.Annotation Information
PubMed ID23583979
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23583979
StudyIdentification of heart rate-associated loci and their effects on cardiac conduction and rhythm disorders.
Disease/TraitHeart rate
Initial sample85,787 European ancestry individuals, 6,568 Indian Asian ancestry indiviudals
Replication sample88,823 European ancestry individuals
Region7q21.3
Chromosome idchr7
Chromosome position93920284
Reported geneGNG11
Mapped geneLOC105375402
Upstream gene id
Downstream gene id
SNP gene ids105375402
Upstream gene distance
Downstream gene distance
SNP risk allelers180242-T
SNPsrs180242
Merged0
SNP id current180242
Contextupstream_gene_variant
Intergenic0
Allele frequency0.333
P value0.000000000007
Pvalue mlog11.1549019599857
P value text
Or beta0.316
%95 Ci[0.21-0.42] unit increase
PlatformAffymetrix, Illumina [2516789] (imputed)
CNVN
Mapped traitheart rate
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004326
Study accessionGCST001969