SNP Detail For rs1801591
1.Mapping Information
Human SNP ID rs1801591
Human chromosome chr15
Human SNP position 76286421
Pig chromosome chr7
Pig SNP position 60968412
2.Annotation Information
PubMed ID26424050
JournalNat Commun
Linkwww.ncbi.nlm.nih.gov/pubmed/26424050
StudyGenome-wide association study identifies multiple susceptibility loci for glioma.
Disease/TraitNon-glioblastoma glioma
Initial sample2,364 Northern European ancestry cases, 7,435 Northern European ancestry controls
Replication sampleup to 1,490 European ancestry cases, up to 1,723 European ancestry controls
Region15q24.2
Chromosome idchr15
Chromosome position76286421
Reported geneETFA
Mapped geneETFA
Upstream gene id
Downstream gene id
SNP gene ids2108
Upstream gene distance
Downstream gene distance
SNP risk allelers1801591-A
SNPsrs1801591
Merged
SNP id current1801591
Contextmissense_variant
Intergenic0
Allele frequency0.09
P value0.000000006
Pvalue mlog8.22184874961635
P value text
Or beta1.36
%95 Ci[1.23鈥?.51]
PlatformIllumina [at least 8427548] (imputed)
CNVN
Mapped traitcentral nervous system cancer
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000326
Study accessionGCST003227