Human SNP ID | rs1800682 |
---|---|
Human chromosome | chr10 |
Human SNP position | 88990206 |
Pig chromosome | chr14 |
Pig SNP position | 109911339 |
PubMed ID | 24292274 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24292274 |
Study | A genome-wide association study identifies multiple susceptibility loci for chronic lymphocytic leukemia. |
Disease/Trait | Chronic lymphocytic leukemia |
Initial sample | 1,739 European ancestry cases, 5,199 European ancestry controls |
Replication sample | 1,144 European ancestry cases, 3,151 European ancestry controls |
Region | 10q23.31 |
Chromosome id | chr10 |
Chromosome position | 88990206 |
Reported gene | ACTA, FAS |
Mapped gene | ACTA2, FAS |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 59, 355 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1800682-A |
SNPs | rs1800682 |
Merged | 0 |
SNP id current | 1800682 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.54 |
P value | 0.00000002 |
Pvalue mlog | 7.69897000433601 |
P value text | |
Or beta | 1.25 |
%95 Ci | [NR] |
Platform | Illumina [450000] (imputed) |
CNV | N |
Mapped trait | chronic lymphocytic leukemia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000095 |
Study accession | GCST002299 |