Human SNP ID | rs1795851 |
---|---|
Human chromosome | chr12 |
Human SNP position | 104532106 |
Pig chromosome | chr5 |
Pig SNP position | 83444129 |
PubMed ID | 26584805 |
---|---|
Journal | Genes Nutr |
Link | www.ncbi.nlm.nih.gov/pubmed/26584805 |
Study | A genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population. |
Disease/Trait | Plasma omega-6 polyunsaturated fatty acid levels (arachidonic acid) |
Initial sample | 717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls |
Replication sample | NA |
Region | 12q23.3 |
Chromosome id | chr12 |
Chromosome position | 104532106 |
Reported gene | NR |
Mapped gene | CHST11 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 50515 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1795851-G |
SNPs | rs1795851 |
Merged | |
SNP id current | 1795851 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.1917 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 0.0521 |
%95 Ci | [0.029-0.075] unit increase |
Platform | Illumina [up to 1980188] (imputed) |
CNV | N |
Mapped trait | arachidonic acid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006808 |
Study accession | GCST003236 |