SNP Detail For rs17879755
1.Mapping Information
Human SNP ID rs17879755
Human chromosome chr3
Human SNP position 3106297
Pig chromosome chr13
Pig SNP position 65983855
2.Annotation Information
PubMed ID23166209
JournalCirc Cardiovasc Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23166209
StudyImpact of ancestry and common genetic variants on QT interval in African Americans.
Disease/TraitQT interval
Initial sample13,105 African American individuals
Replication sampleNA
Region3p26.2
Chromosome idchr3
Chromosome position3106297
Reported geneNR
Mapped geneIL5RA
Upstream gene id
Downstream gene id
SNP gene ids3568
Upstream gene distance
Downstream gene distance
SNP risk allelers17879755-C
SNPsrs17879755
Merged0
SNP id current17879755
Contextintron_variant
Intergenic0
Allele frequency0.91
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta5.64
%95 Ci[3.37-7.91] unit increase
PlatformAffymetrix, Illumina [2800000] (imputed)
CNVN
Mapped traitQT interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004682
Study accessionGCST001746