Human SNP ID | rs17879755 |
---|---|
Human chromosome | chr3 |
Human SNP position | 3106297 |
Pig chromosome | chr13 |
Pig SNP position | 65983855 |
PubMed ID | 23166209 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23166209 |
Study | Impact of ancestry and common genetic variants on QT interval in African Americans. |
Disease/Trait | QT interval |
Initial sample | 13,105 African American individuals |
Replication sample | NA |
Region | 3p26.2 |
Chromosome id | chr3 |
Chromosome position | 3106297 |
Reported gene | NR |
Mapped gene | IL5RA |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3568 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17879755-C |
SNPs | rs17879755 |
Merged | 0 |
SNP id current | 17879755 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.91 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 5.64 |
%95 Ci | [3.37-7.91] unit increase |
Platform | Affymetrix, Illumina [2800000] (imputed) |
CNV | N |
Mapped trait | QT interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004682 |
Study accession | GCST001746 |