Human SNP ID | rs17879437 |
---|---|
Human chromosome | chr19 |
Human SNP position | 36151982 |
Pig chromosome | chr6 |
Pig SNP position | 40922413 |
PubMed ID | 25188341 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25188341 |
Study | Genome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias. |
Disease/Trait | Neuritic plaque |
Initial sample | up to 4,232 individuals |
Replication sample | NA |
Region | 19q13.12 |
Chromosome id | chr19 |
Chromosome position | 36151982 |
Reported gene | COX7A1 |
Mapped gene | COX7A1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1346 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17879437-C |
SNPs | rs17879437 |
Merged | 0 |
SNP id current | 17879437 |
Context | 5_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.7681 |
P value | 0.0000006 |
Pvalue mlog | 6.22184874961635 |
P value text | (Case/control) |
Or beta | 0.4789 |
%95 Ci | [0.29-0.67] unit increase |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | neuritic plaque measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006798 |
Study accession | GCST002592 |