Human SNP ID | rs1787200 |
---|---|
Human chromosome | chr18 |
Human SNP position | 49061284 |
Pig chromosome | chr1 |
Pig SNP position | 108236014 |
PubMed ID | 21998595 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21998595 |
Study | Identification, replication, and fine-mapping of Loci associated with adult height in individuals of african ancestry. |
Disease/Trait | Height |
Initial sample | 20,427 African ancestry individuals |
Replication sample | Up to 16,436 African American individuals |
Region | 18q21.1 |
Chromosome id | chr18 |
Chromosome position | 49061284 |
Reported gene | DYM |
Mapped gene | DYM |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 54808 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1787200-A |
SNPs | rs1787200 |
Merged | 0 |
SNP id current | 1787200 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.37 |
P value | 0.0000000001 |
Pvalue mlog | 10 |
P value text | |
Or beta | 0.053 |
%95 Ci | [0.037-0.069] unit increase |
Platform | Affymetrix, Illumina [3310998] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST001263 |
PubMed ID | 22021425 |
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22021425 |
Study | Genome-wide association study of body height in African Americans: the Women__s Health Initiative SNP Health Association Resource (SHARe). |
Disease/Trait | Height |
Initial sample | 8,149 African American female individuals |
Replication sample | Up to 20,809 African American and African ancestry individuals |
Region | 18q21.1 |
Chromosome id | chr18 |
Chromosome position | 49061284 |
Reported gene | DYM |
Mapped gene | DYM |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 54808 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1787200-T |
SNPs | rs1787200 |
Merged | 0 |
SNP id current | 1787200 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.37 |
P value | 0.0000000007 |
Pvalue mlog | 9.15490195998574 |
P value text | |
Or beta | 0.044 |
%95 Ci | [0.024-0.064] unit increase |
Platform | Affymetrix [855034] |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST001290 |