SNP Detail For rs1784499
1.Mapping Information
Human SNP ID rs1784499
Human chromosome chr11
Human SNP position 73648191
Pig chromosome chr9
Pig SNP position 8870310
2.Annotation Information
PubMed ID25524916
JournalDiabetes
Linkwww.ncbi.nlm.nih.gov/pubmed/25524916
StudyGenetic Variants Associated with Quantitative Glucose Homeostasis Traits Translate to Type 2 Diabetes in Mexican Americans: The GUARDIAN (Genetics Underlying Diabetes in Hispanics) Consortium.
Disease/TraitGlucose homeostasis traits
Initial sampleup to 4,176 Mexican American individuals
Replication sampleNA
Region11q13.4
Chromosome idchr11
Chromosome position73648191
Reported genePLEKHB1
Mapped genePLEKHB1
Upstream gene id
Downstream gene id
SNP gene ids58473
Upstream gene distance
Downstream gene distance
SNP risk allelers1784499-?
SNPsrs1784499
Merged0
SNP id current1784499
Context5_prime_UTR_variant
Intergenic0
Allele frequency
P value0.000006
Pvalue mlog5.22184874961635
P value text(MCRI)
Or beta0.97
%95 Ci[0.54-1.4] unit increase
PlatformIllumina [693128]
CNVN
Mapped traitinsulin metabolic clearance rate measurement, glucose homeostasis measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006830, http://www.ebi.ac.uk/efo/EFO_0006896
Study accessionGCST002726