SNP Detail For rs17828380
1.Mapping Information
Human SNP ID rs17828380
Human chromosome chr15
Human SNP position 63175688
Pig chromosome chr1
Pig SNP position 120083946
2.Annotation Information
PubMed ID24564958
JournalMol Autism
Linkwww.ncbi.nlm.nih.gov/pubmed/24564958
StudyVariability in the common genetic architecture of social-communication spectrum phenotypes during childhood and adolescence.
Disease/TraitSocial communication problems
Initial sampleUp to 5,628 European ancestry individuals
Replication sampleNA
Region15q22.2
Chromosome idchr15
Chromosome position63175688
Reported geneRAB8B
Mapped geneRPS27L - LOC101928972
Upstream gene id51065
Downstream gene id101928972
SNP gene ids
Upstream gene distance18146
Downstream gene distance2346
SNP risk allelers17828380-C
SNPsrs17828380
Merged0
SNP id current17828380
Contextintergenic_variant
Intergenic1
Allele frequency0.11
P value0.000005
Pvalue mlog5.30102999566398
P value text(Age 8)
Or beta0.18
%95 Ci[0.1-0.26] unit increase
PlatformIllumina [2293137] (imputed)
CNVN
Mapped traitsocial communication impairment
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005427
Study accessionGCST002367