SNP Detail For rs17818399
1.Mapping Information
Human SNP ID rs17818399
Human chromosome chr2
Human SNP position 46598887
Pig chromosome chr3
Pig SNP position 100027239
2.Annotation Information
PubMed ID20966902
JournalObesity (Silver Spring)
Linkwww.ncbi.nlm.nih.gov/pubmed/20966902
StudyGenome-wide association study of anthropometric traits and evidence of interactions with age and study year in Filipino women.
Disease/TraitHeight
Initial sample1,792 Filipino ancestry females
Replication sampleNA
Region2p21
Chromosome idchr2
Chromosome position46598887
Reported genePIGF, CRIPT
Mapped genePIGF
Upstream gene id
Downstream gene id
SNP gene ids5281
Upstream gene distance
Downstream gene distance
SNP risk allelers17818399-C
SNPsrs17818399
Merged0
SNP id current17818399
Contextintron_variant
Intergenic0
Allele frequency0.17
P value0.0000003
Pvalue mlog6.52287874528033
P value text
Or beta1.13
%95 Ci[0.70-1.56] cm increase
PlatformAffymetrix [2073674] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST000839