Human SNP ID | rs17818399 |
---|---|
Human chromosome | chr2 |
Human SNP position | 46598887 |
Pig chromosome | chr3 |
Pig SNP position | 100027239 |
PubMed ID | 20966902 |
---|---|
Journal | Obesity (Silver Spring) |
Link | www.ncbi.nlm.nih.gov/pubmed/20966902 |
Study | Genome-wide association study of anthropometric traits and evidence of interactions with age and study year in Filipino women. |
Disease/Trait | Height |
Initial sample | 1,792 Filipino ancestry females |
Replication sample | NA |
Region | 2p21 |
Chromosome id | chr2 |
Chromosome position | 46598887 |
Reported gene | PIGF, CRIPT |
Mapped gene | PIGF |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5281 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17818399-C |
SNPs | rs17818399 |
Merged | 0 |
SNP id current | 17818399 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.17 |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | |
Or beta | 1.13 |
%95 Ci | [0.70-1.56] cm increase |
Platform | Affymetrix [2073674] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST000839 |