Human SNP ID | rs17736906 |
---|---|
Human chromosome | chr7 |
Human SNP position | 53914933 |
Pig chromosome | chr9 |
Pig SNP position | 152822901 |
PubMed ID | 24556642 |
---|---|
Journal | Caries Res |
Link | www.ncbi.nlm.nih.gov/pubmed/24556642 |
Study | Genome-Wide Association Study of Primary Dentition Pit-and-Fissure and Smooth Surface Caries. |
Disease/Trait | Pit-and-Fissure caries |
Initial sample | 979 European ancestry individuals |
Replication sample | NA |
Region | 7p11.2 |
Chromosome id | chr7 |
Chromosome position | 53914933 |
Reported gene | FLJ45974 |
Mapped gene | LOC102723574 - HPVC1 |
Upstream gene id | 102723574 |
Downstream gene id | 3262 |
SNP gene ids | |
Upstream gene distance | 51415 |
Downstream gene distance | 286291 |
SNP risk allele | rs17736906-A |
SNPs | rs17736906 |
Merged | 0 |
SNP id current | 17736906 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.1558 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.7446 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [1216074] (imputed) |
CNV | N |
Mapped trait | pit and fissure surface dental caries |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006338 |
Study accession | GCST002358 |