SNP Detail For rs17736767
1.Mapping Information
Human SNP ID rs17736767
Human chromosome chr5
Human SNP position 99244260
Pig chromosome chr2
Pig SNP position 109362702
2.Annotation Information
PubMed ID22044751
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22044751
StudyHeritability and genome-wide association analysis of renal sinus fat accumulation in the Framingham Heart Study.
Disease/TraitRenal sinus fat
Initial sample2,809 European ancestry individuals
Replication sampleNA
Region5q21.1
Chromosome idchr5
Chromosome position99244260
Reported geneCHD1
Mapped geneLOC102724810 - LOC100652833
Upstream gene id102724810
Downstream gene id100652833
SNP gene ids
Upstream gene distance240324
Downstream gene distance277754
SNP risk allelers17736767-G
SNPsrs17736767
Merged0
SNP id current17736767
Contextintergenic_variant
Intergenic1
Allele frequency0.27
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta0.208
%95 Ci[0.12-0.30] unit decrease
PlatformAffymetrix [~ 2500000] (imputed)
CNVN
Mapped traitrenal sinus adipose tissue measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004864
Study accessionGCST001304