Human SNP ID | rs17736767 |
---|---|
Human chromosome | chr5 |
Human SNP position | 99244260 |
Pig chromosome | chr2 |
Pig SNP position | 109362702 |
PubMed ID | 22044751 |
---|---|
Journal | BMC Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22044751 |
Study | Heritability and genome-wide association analysis of renal sinus fat accumulation in the Framingham Heart Study. |
Disease/Trait | Renal sinus fat |
Initial sample | 2,809 European ancestry individuals |
Replication sample | NA |
Region | 5q21.1 |
Chromosome id | chr5 |
Chromosome position | 99244260 |
Reported gene | CHD1 |
Mapped gene | LOC102724810 - LOC100652833 |
Upstream gene id | 102724810 |
Downstream gene id | 100652833 |
SNP gene ids | |
Upstream gene distance | 240324 |
Downstream gene distance | 277754 |
SNP risk allele | rs17736767-G |
SNPs | rs17736767 |
Merged | 0 |
SNP id current | 17736767 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.27 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | 0.208 |
%95 Ci | [0.12-0.30] unit decrease |
Platform | Affymetrix [~ 2500000] (imputed) |
CNV | N |
Mapped trait | renal sinus adipose tissue measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004864 |
Study accession | GCST001304 |