Human SNP ID | rs17727261 |
---|---|
Human chromosome | chr2 |
Human SNP position | 124524333 |
Pig chromosome | chr15 |
Pig SNP position | 31678639 |
PubMed ID | 19721433 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/19721433 |
Study | Genome-wide pharmacogenomic analysis of response to treatment with antipsychotics. |
Disease/Trait | Response to antipsychotic treatment |
Initial sample | 494 European ancestry cases, 244 African American and other ancestry cases |
Replication sample | NA |
Region | 2q14.3 |
Chromosome id | chr2 |
Chromosome position | 124524333 |
Reported gene | CNTNAP5 |
Mapped gene | CNTNAP5 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 129684 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs17727261-? |
SNPs | rs17727261 |
Merged | 0 |
SNP id current | 17727261 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | (risperidone) |
Or beta | 10 |
%95 Ci | [NR] % variance |
Platform | Affymetrix, Perlegen [492900] |
CNV | N |
Mapped trait | response to risperidone |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0097336 |
Study accession | GCST000473 |