SNP Detail For rs17724172
1.Mapping Information
Human SNP ID rs17724172
Human chromosome chr18
Human SNP position 3512218
Pig chromosome chr6
Pig SNP position 96214928
2.Annotation Information
PubMed ID23247143
JournalCirc Cardiovasc Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23247143
StudyAssociation of genome-wide variation with highly sensitive cardiac troponin-T levels in European Americans and Blacks: a meta-analysis from atherosclerosis risk in communities and cardiovascular health studies.
Disease/TraitCardiac Troponin-T levels
Initial sample9,491 European ancestry individuals, up to 2,053 African American individuals
Replication sampleNA
Region18p11.31
Chromosome idchr18
Chromosome position3512218
Reported geneDLGAP1
Mapped geneDLGAP1
Upstream gene id
Downstream gene id
SNP gene ids9229
Upstream gene distance
Downstream gene distance
SNP risk allelers17724172-C
SNPsrs17724172
Merged0
SNP id current17724172
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000009
Pvalue mlog5.04575749056067
P value text(Dichotomous variable)
Or beta2.04
%95 Ci[1.49-2.78]
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitcardiac troponin T measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005043
Study accessionGCST001776